Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CSPG5O95196 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.27■□□□□ 0.36
CSPG5O95196 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.27■□□□□ 0.36
CSPG5O95196 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.27■□□□□ 0.36
CSPG5O95196 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.27■□□□□ 0.36
CSPG5O95196 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CSPG5O95196 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CSPG5O95196 AC013467.2-201ENST00000605472 835 ntBASIC17.27■□□□□ 0.36
CSPG5O95196 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.27■□□□□ 0.35
CSPG5O95196 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CSPG5O95196 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CSPG5O95196 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.27■□□□□ 0.35
CSPG5O95196 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSPG5O95196 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 AL645728.1-201ENST00000366221 2101 ntBASIC17.26■□□□□ 0.35
CSPG5O95196 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC104989.1-201ENST00000519711 778 ntBASIC17.26■□□□□ 0.35
CSPG5O95196 FAM8A2P-201ENST00000528813 1142 ntBASIC17.26■□□□□ 0.35
CSPG5O95196 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.26■□□□□ 0.35
CSPG5O95196 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG5O95196 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC010319.3-201ENST00000597028 470 ntBASIC17.26■□□□□ 0.35
CSPG5O95196 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 AC099568.2-201ENST00000609194 695 ntBASIC17.26■□□□□ 0.35
CSPG5O95196 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG5O95196 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG5O95196 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG5O95196 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG5O95196 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 FER1L4-210ENST00000615531 5998 ntBASIC17.25■□□□□ 0.35
CSPG5O95196 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG5O95196 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG5O95196 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG5O95196 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG5O95196 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.25■□□□□ 0.35
CSPG5O95196 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.25■□□□□ 0.35
CSPG5O95196 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG5O95196 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CSPG5O95196 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.25■□□□□ 0.35
CSPG5O95196 AC124947.2-201ENST00000547118 1133 ntBASIC17.25■□□□□ 0.35
CSPG5O95196 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.25■□□□□ 0.35
CSPG5O95196 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.25■□□□□ 0.35
CSPG5O95196 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 AC084346.2-201ENST00000607097 949 ntBASIC17.25■□□□□ 0.35
CSPG5O95196 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSPG5O95196 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG5O95196 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG5O95196 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms