Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KDELR3O43731 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
KDELR3O43731 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.25■□□□□ 0.19
KDELR3O43731 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.25■□□□□ 0.19
KDELR3O43731 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.25■□□□□ 0.19
KDELR3O43731 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.25■□□□□ 0.19
KDELR3O43731 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.25■□□□□ 0.19
KDELR3O43731 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.25■□□□□ 0.19
KDELR3O43731 AC044860.1-202ENST00000559481 777 ntBASIC16.25■□□□□ 0.19
KDELR3O43731 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.25■□□□□ 0.19
KDELR3O43731 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.25■□□□□ 0.19
KDELR3O43731 AC025048.3-201ENST00000590609 569 ntBASIC16.25■□□□□ 0.19
KDELR3O43731 AC005702.4-201ENST00000618393 416 ntBASIC16.25■□□□□ 0.19
KDELR3O43731 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KDELR3O43731 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.25■□□□□ 0.19
KDELR3O43731 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDELR3O43731 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KDELR3O43731 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KDELR3O43731 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 AC018892.3-201ENST00000623986 2499 ntBASIC16.24■□□□□ 0.19
KDELR3O43731 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
KDELR3O43731 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.24■□□□□ 0.19
KDELR3O43731 UGT1A2P-201ENST00000454886 866 ntBASIC16.24■□□□□ 0.19
KDELR3O43731 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.24■□□□□ 0.19
KDELR3O43731 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.24■□□□□ 0.19
KDELR3O43731 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.24■□□□□ 0.19
KDELR3O43731 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KDELR3O43731 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
KDELR3O43731 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.24■□□□□ 0.19
KDELR3O43731 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDELR3O43731 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
KDELR3O43731 Z97205.2-201ENST00000564697 1639 ntBASIC16.23■□□□□ 0.19
KDELR3O43731 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 BTBD7P1-201ENST00000447253 1453 ntBASIC16.23■□□□□ 0.19
KDELR3O43731 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
KDELR3O43731 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.23■□□□□ 0.19
KDELR3O43731 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KDELR3O43731 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.23■□□□□ 0.19
KDELR3O43731 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.23■□□□□ 0.19
KDELR3O43731 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.23■□□□□ 0.19
KDELR3O43731 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.23■□□□□ 0.19
KDELR3O43731 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.23■□□□□ 0.19
KDELR3O43731 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms