Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.13□□□□□ -0.47
SNAI2O43623 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 AC131009.4-201ENST00000624048 1740 ntBASIC12.13□□□□□ -0.47
SNAI2O43623 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.13□□□□□ -0.47
SNAI2O43623 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SNAI2O43623 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.13□□□□□ -0.47
SNAI2O43623 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SNAI2O43623 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.13□□□□□ -0.47
SNAI2O43623 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SNAI2O43623 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SNAI2O43623 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.13□□□□□ -0.47
SNAI2O43623 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNAI2O43623 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SNAI2O43623 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SNAI2O43623 TSSC2-201ENST00000450217 709 ntBASIC12.12□□□□□ -0.47
SNAI2O43623 TOB2P1-201ENST00000469761 992 ntBASIC12.12□□□□□ -0.47
SNAI2O43623 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SNAI2O43623 DUX4L26-201ENST00000489078 1255 ntBASIC12.12□□□□□ -0.47
SNAI2O43623 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SNAI2O43623 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 REXO1L3P-201ENST00000622202 1288 ntBASIC12.12□□□□□ -0.47
SNAI2O43623 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.12□□□□□ -0.47
SNAI2O43623 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SNAI2O43623 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNAI2O43623 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SNAI2O43623 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.11□□□□□ -0.47
SNAI2O43623 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.11□□□□□ -0.47
SNAI2O43623 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SNAI2O43623 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 AC005840.4-201ENST00000541242 2494 ntBASIC12.11□□□□□ -0.47
SNAI2O43623 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms