Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM58CP-201ENST00000435741 640 ntBASIC14.32□□□□□ -0.12
SGCEO43556 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.32□□□□□ -0.12
SGCEO43556 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.32□□□□□ -0.12
SGCEO43556 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.32□□□□□ -0.12
SGCEO43556 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 AC099522.2-201ENST00000607001 744 ntBASIC14.32□□□□□ -0.12
SGCEO43556 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SGCEO43556 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.32□□□□□ -0.12
SGCEO43556 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.32□□□□□ -0.12
SGCEO43556 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.32□□□□□ -0.12
SGCEO43556 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SGCEO43556 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SGCEO43556 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SGCEO43556 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SGCEO43556 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 MCCD1P2-201ENST00000423228 335 ntBASIC14.31□□□□□ -0.12
SGCEO43556 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.31□□□□□ -0.12
SGCEO43556 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 PRYP6-201ENST00000514804 343 ntBASIC14.31□□□□□ -0.12
SGCEO43556 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.31□□□□□ -0.12
SGCEO43556 PGAM5P1-201ENST00000518923 814 ntBASIC14.31□□□□□ -0.12
SGCEO43556 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 AKAP8P1-201ENST00000434743 1349 ntBASIC14.31□□□□□ -0.12
SGCEO43556 PMS2P7-201ENST00000506558 1336 ntBASIC14.31□□□□□ -0.12
SGCEO43556 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SGCEO43556 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SGCEO43556 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SGCEO43556 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SGCEO43556 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SGCEO43556 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SGCEO43556 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SGCEO43556 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms