Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.68■□□□□ 0.26
MSI1O43347 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
MSI1O43347 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 MIR648-201ENST00000385046 94 ntBASIC16.68■□□□□ 0.26
MSI1O43347 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.68■□□□□ 0.26
MSI1O43347 AC004987.2-201ENST00000395959 1148 ntBASIC16.68■□□□□ 0.26
MSI1O43347 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 AC009477.1-201ENST00000452936 217 ntBASIC16.68■□□□□ 0.26
MSI1O43347 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 AC009407.1-201ENST00000568958 598 ntBASIC16.68■□□□□ 0.26
MSI1O43347 AC008738.7-201ENST00000609744 511 ntBASIC16.68■□□□□ 0.26
MSI1O43347 AL033527.5-202ENST00000641632 1098 ntBASIC16.68■□□□□ 0.26
MSI1O43347 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.68■□□□□ 0.26
MSI1O43347 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.68■□□□□ 0.26
MSI1O43347 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MSI1O43347 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
MSI1O43347 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 AZGP1P1-201ENST00000411909 902 ntBASIC16.67■□□□□ 0.26
MSI1O43347 HIST3H2BA-201ENST00000436555 524 ntBASIC16.67■□□□□ 0.26
MSI1O43347 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.67■□□□□ 0.26
MSI1O43347 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.67■□□□□ 0.26
MSI1O43347 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MSI1O43347 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.67■□□□□ 0.26
MSI1O43347 MIR4745-201ENST00000577608 62 ntBASIC16.67■□□□□ 0.26
MSI1O43347 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.67■□□□□ 0.26
MSI1O43347 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.67■□□□□ 0.26
MSI1O43347 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MSI1O43347 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 AP003680.1-201ENST00000598970 3660 ntBASIC16.67■□□□□ 0.26
MSI1O43347 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 AP001282.1-201ENST00000531301 1499 ntBASIC16.67■□□□□ 0.26
MSI1O43347 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.67■□□□□ 0.26
MSI1O43347 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSI1O43347 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MSI1O43347 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.66■□□□□ 0.26
MSI1O43347 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MSI1O43347 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSI1O43347 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.66■□□□□ 0.26
MSI1O43347 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.66■□□□□ 0.26
MSI1O43347 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.66■□□□□ 0.26
MSI1O43347 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.66■□□□□ 0.26
MSI1O43347 TSPY16P-201ENST00000449843 468 ntBASIC16.66■□□□□ 0.26
MSI1O43347 KRT8P37-201ENST00000451609 1420 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms