Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
MID1O15344 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.07■□□□□ 0.16
MID1O15344 EEF1DP4-201ENST00000446006 880 ntBASIC16.07■□□□□ 0.16
MID1O15344 MYCLP2-201ENST00000449268 967 ntBASIC16.07■□□□□ 0.16
MID1O15344 INE1-201ENST00000456273 945 ntBASIC16.07■□□□□ 0.16
MID1O15344 RN7SL752P-201ENST00000463779 287 ntBASIC16.07■□□□□ 0.16
MID1O15344 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
MID1O15344 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.07■□□□□ 0.16
MID1O15344 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MID1O15344 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 BNIP3P1-202ENST00000550043 1585 ntBASIC16.07■□□□□ 0.16
MID1O15344 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.07■□□□□ 0.16
MID1O15344 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.07■□□□□ 0.16
MID1O15344 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MID1O15344 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.06■□□□□ 0.16
MID1O15344 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.06■□□□□ 0.16
MID1O15344 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.06■□□□□ 0.16
MID1O15344 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 AC123567.1-201ENST00000548294 1261 ntBASIC16.06■□□□□ 0.16
MID1O15344 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MID1O15344 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MID1O15344 LINC01115-203ENST00000606068 577 ntBASIC16.06■□□□□ 0.16
MID1O15344 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MID1O15344 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MID1O15344 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.06■□□□□ 0.16
MID1O15344 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MID1O15344 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 Z97205.2-201ENST00000564697 1639 ntBASIC16.05■□□□□ 0.16
MID1O15344 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.05■□□□□ 0.16
MID1O15344 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MID1O15344 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.05■□□□□ 0.16
MID1O15344 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 AC098850.1-201ENST00000419919 790 ntBASIC16.05■□□□□ 0.16
MID1O15344 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
MID1O15344 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 MEIS3P1-201ENST00000495167 958 ntBASIC16.05■□□□□ 0.16
MID1O15344 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.05■□□□□ 0.16
MID1O15344 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.05■□□□□ 0.16
MID1O15344 AC099568.2-201ENST00000609194 695 ntBASIC16.05■□□□□ 0.16
MID1O15344 IGHV3-72-202ENST00000621503 303 ntBASIC16.05■□□□□ 0.16
MID1O15344 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.05■□□□□ 0.16
MID1O15344 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms