Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SPTBN2O15020 IGLV3-15-201ENST00000518356 244 ntBASIC15.16■□□□□ 0.02
SPTBN2O15020 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.16■□□□□ 0.02
SPTBN2O15020 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.16■□□□□ 0.02
SPTBN2O15020 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.16■□□□□ 0.02
SPTBN2O15020 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.16■□□□□ 0.02
SPTBN2O15020 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.16■□□□□ 0.02
SPTBN2O15020 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.16■□□□□ 0.02
SPTBN2O15020 KRT8P39-201ENST00000396270 1433 ntBASIC15.15■□□□□ 0.02
SPTBN2O15020 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.15■□□□□ 0.02
SPTBN2O15020 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.15■□□□□ 0.02
SPTBN2O15020 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SPTBN2O15020 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 AC008132.1-202ENST00000342005 1389 ntBASIC15.15■□□□□ 0.02
SPTBN2O15020 AP000974.1-201ENST00000623909 2387 ntBASIC15.15■□□□□ 0.02
SPTBN2O15020 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SPTBN2O15020 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.15■□□□□ 0.02
SPTBN2O15020 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SPTBN2O15020 DRD5P1-201ENST00000456605 1438 ntBASIC15.14■□□□□ 0.02
SPTBN2O15020 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SPTBN2O15020 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.14■□□□□ 0.01
SPTBN2O15020 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 AC025181.2-201ENST00000606994 802 ntBASIC15.14■□□□□ 0.01
SPTBN2O15020 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.14■□□□□ 0.01
SPTBN2O15020 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 AC093525.9-201ENST00000624961 1746 ntBASIC15.14■□□□□ 0.01
SPTBN2O15020 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
SPTBN2O15020 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.14■□□□□ 0.01
SPTBN2O15020 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPTBN2O15020 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.13■□□□□ 0.01
SPTBN2O15020 AC006277.1-201ENST00000624348 1610 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.13■□□□□ 0.01
SPTBN2O15020 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 Z97180.1-201ENST00000445173 988 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPTBN2O15020 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.13■□□□□ 0.01
SPTBN2O15020 AP001065.2-201ENST00000617205 644 ntBASIC15.13■□□□□ 0.01
SPTBN2O15020 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms