Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
KPNA4O00629 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KPNA4O00629 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KPNA4O00629 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KPNA4O00629 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
KPNA4O00629 AL596087.1-201ENST00000400979 1969 ntBASIC15.15■□□□□ 0.02
KPNA4O00629 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 PCGF3-213ENST00000620529 1899 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 GPAA1P2-202ENST00000606848 1787 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.14■□□□□ 0.01
KPNA4O00629 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 AC005412.3-201ENST00000580309 715 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 AC008667.4-201ENST00000607370 168 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.14■□□□□ 0.01
KPNA4O00629 AC148477.8-201ENST00000624298 468 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 AC005593.1-201ENST00000624894 515 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KPNA4O00629 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.14■□□□□ 0.01
KPNA4O00629 PCDHA3-202ENST00000532566 4594 ntBASIC15.14■□□□□ 0.01
KPNA4O00629 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KPNA4O00629 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KPNA4O00629 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KPNA4O00629 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.13■□□□□ 0.01
KPNA4O00629 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 KRT18P67-201ENST00000432816 1264 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.13■□□□□ 0.01
KPNA4O00629 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 AC018712.1-201ENST00000455767 687 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.13■□□□□ 0.01
KPNA4O00629 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KPNA4O00629 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.13■□□□□ 0.01
KPNA4O00629 IGHV3-65-201ENST00000523210 341 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.13■□□□□ 0.01
KPNA4O00629 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KPNA4O00629 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
KPNA4O00629 PPT1-215ENST00000641471 2368 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KPNA4O00629 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.13■□□□□ 0.01
KPNA4O00629 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.13■□□□□ 0.01
KPNA4O00629 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 AC129492.6-201ENST00000611383 1305 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KPNA4O00629 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 AL137784.3-201ENST00000623858 2288 ntBASIC15.13■□□□□ 0.01
KPNA4O00629 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KPNA4O00629 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms