Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.27■□□□□ 0.04
UPK1AO00322 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1AO00322 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
UPK1AO00322 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.27■□□□□ 0.03
UPK1AO00322 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
UPK1AO00322 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
UPK1AO00322 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.27■□□□□ 0.03
UPK1AO00322 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 AL589702.1-201ENST00000641229 1509 ntBASIC15.27■□□□□ 0.03
UPK1AO00322 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1AO00322 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1AO00322 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
UPK1AO00322 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.26■□□□□ 0.03
UPK1AO00322 TFAMP1-201ENST00000412727 736 ntBASIC15.26■□□□□ 0.03
UPK1AO00322 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1AO00322 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
UPK1AO00322 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 AL135744.1-201ENST00000565098 629 ntBASIC15.26■□□□□ 0.03
UPK1AO00322 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.26■□□□□ 0.03
UPK1AO00322 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.26■□□□□ 0.03
UPK1AO00322 C20orf181-201ENST00000623918 480 ntBASIC15.26■□□□□ 0.03
UPK1AO00322 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1AO00322 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
UPK1AO00322 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
UPK1AO00322 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1AO00322 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UPK1AO00322 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1AO00322 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 AC138035.3-201ENST00000622706 2791 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 AL009178.2-201ENST00000597278 2719 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UPK1AO00322 YBX2P1-201ENST00000394192 760 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 ADH5P3-201ENST00000433842 1137 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 FAM86C2P-203ENST00000528684 1004 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 MTDHP5-201ENST00000598980 586 ntBASIC15.25■□□□□ 0.03
UPK1AO00322 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK1AO00322 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms