Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PRAL-201ENST00000624952 3286 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC024909.3-201ENST00000611513 2257 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PRYP6-201ENST00000514804 343 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC040169.1-201ENST00000565382 521 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC002347.1-201ENST00000569543 541 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AP002472.1-201ENST00000577490 586 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC073439.1-201ENST00000624121 1774 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 MIR648-201ENST00000385046 94 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 FAM58CP-201ENST00000435741 640 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC093724.1-201ENST00000448659 1027 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 POLD2P1-201ENST00000511220 997 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 RARRES2P8-201ENST00000566335 367 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC091812.2-201ENST00000619081 385 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 AC138969.2-201ENST00000532739 9932 ntBASIC11.73□□□□□ -0.53
TRGV1A0A0A0MS02 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms