Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 AC093520.2-201ENST00000561830 333 ntBASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX49Q9Y6V7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 GGT3P-204ENST00000453783 1664 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 TSEN15P1-201ENST00000423257 515 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AL645939.2-201ENST00000427340 991 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ADH5P3-201ENST00000433842 1137 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC109322.1-201ENST00000524499 1264 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC022145.2-201ENST00000598203 171 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC099522.2-201ENST00000607001 744 ntBASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX49Q9Y6V7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 TNRC18P2-201ENST00000417666 2714 ntBASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX49Q9Y6V7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms