Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA3PQ9Y6N3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCA3PQ9Y6N3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA3PQ9Y6N3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA3PQ9Y6N3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA3PQ9Y6N3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AC142381.1-201ENST00000426099 345 ntBASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 METTL21AP1-201ENST00000438852 635 ntBASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AC025678.2-201ENST00000562061 970 ntBASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AC022188.1-201ENST00000620960 1664 ntBASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 LINC00628-201ENST00000628516 1289 ntBASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA3PQ9Y6N3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 HLA-J-203ENST00000494367 1087 ntBASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 ALG1L8P-201ENST00000533887 760 ntBASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA3PQ9Y6N3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 AL589702.1-201ENST00000641229 1509 ntBASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms