Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 IL9RP3-201ENST00000442856 1674 ntBASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 PHKG1P2-201ENST00000457537 863 ntBASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AC027237.1-201ENST00000560942 655 ntBASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AC009955.4-201ENST00000597192 544 ntBASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 AL353622.2-201ENST00000605846 425 ntBASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RIMBP3Q9UFD9 FAM90A2P-201ENST00000511144 1395 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 FAM90A25P-201ENST00000528404 1395 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 ENPP7P8-202ENST00000527856 1345 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 PUDPP3-201ENST00000445368 636 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 AC114812.1-204ENST00000449669 728 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 AC244197.1-201ENST00000456494 951 ntBASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC24.74■■□□□ 1.55
RIMBP3Q9UFD9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 AC010503.4-201ENST00000615487 688 ntBASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 LRRC59-203ENST00000576448 1531 ntBASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 ZNF436-AS1-201ENST00000335648 2547 ntBASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
RIMBP3Q9UFD9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 EIF3FP3-201ENST00000434851 1086 ntBASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC004554.1-201ENST00000422830 1468 ntBASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms