Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSFQ9UBX1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AC015922.1-201ENST00000421102 1152 ntBASIC15.14■□□□□ 0.01
CTSFQ9UBX1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AC245100.5-201ENST00000452108 331 ntBASIC15.14■□□□□ 0.01
CTSFQ9UBX1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AC190387.1-201ENST00000551683 408 ntBASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CTSFQ9UBX1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 CRB3P1-201ENST00000449338 276 ntBASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SPDYE18-201ENST00000510091 1050 ntBASIC15.13■□□□□ 0.01
CTSFQ9UBX1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 MIR6069-201ENST00000620069 79 ntBASIC15.13■□□□□ 0.01
CTSFQ9UBX1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.13■□□□□ 0.01
CTSFQ9UBX1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTSFQ9UBX1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms