Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL512652.2-201ENST00000625156 1716 ntBASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 AL080243.2-201ENST00000418783 582 ntBASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
HDAC6Q9UBN7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
HDAC6Q9UBN7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 AC103702.1-201ENST00000548801 2630 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 AC007541.1-201ENST00000570282 1469 ntBASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HDAC6Q9UBN7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms