Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCFC1R1Q9NWW0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.58■□□□□ 0.25
HCFC1R1Q9NWW0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
HCFC1R1Q9NWW0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 TOMM22P5-201ENST00000416399 439 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 BCRP2-202ENST00000447763 634 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 PHKG1P2-201ENST00000457537 863 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 BCRP6-201ENST00000510112 632 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 BCRP7-201ENST00000511549 544 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 ME2P1-201ENST00000426028 1970 ntBASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1R1Q9NWW0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC124283.3-201ENST00000570869 594 ntBASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 INTS4P2-202ENST00000614726 2019 ntBASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1R1Q9NWW0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1R1Q9NWW0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms