Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC093520.2-201ENST00000561830 333 ntBASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC004449.1-201ENST00000564240 433 ntBASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 TSEN15P1-201ENST00000423257 515 ntBASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 HLA-J-203ENST00000494367 1087 ntBASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AL512356.2-201ENST00000546955 174 ntBASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AP001059.3-201ENST00000619053 235 ntBASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.47□□□□□ -0.09
PARPBPQ9NWS1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 FAM58DP-201ENST00000428076 619 ntBASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms