Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTPS2Q9NRF8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTPS2Q9NRF8 AC021097.1-201ENST00000607902 574 ntBASIC15.06■□□□□ 0
CTPS2Q9NRF8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTPS2Q9NRF8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTPS2Q9NRF8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CTPS2Q9NRF8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 AC069224.1-201ENST00000566372 1715 ntBASIC15.06■□□□□ 0
CTPS2Q9NRF8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CTPS2Q9NRF8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 AC073347.1-201ENST00000421633 2643 ntBASIC15.05■□□□□ 0
CTPS2Q9NRF8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTPS2Q9NRF8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.05■□□□□ 0
CTPS2Q9NRF8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 AC023274.1-201ENST00000418278 595 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 AC074386.1-202ENST00000463561 864 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 KRT18P58-201ENST00000527480 1120 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 PDPK2P-202ENST00000562415 1191 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 MIR3909-201ENST00000579518 119 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 AL009183.1-201ENST00000603760 355 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 AC092919.2-201ENST00000623631 1645 ntBASIC15.05■□□□□ -0
CTPS2Q9NRF8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTPS2Q9NRF8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CTPS2Q9NRF8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.04■□□□□ -0
CTPS2Q9NRF8 AP000347.1-202ENST00000435868 847 ntBASIC15.04■□□□□ -0
CTPS2Q9NRF8 AC140658.5-201ENST00000438532 169 ntBASIC15.04■□□□□ -0
CTPS2Q9NRF8 POLD2P1-201ENST00000511220 997 ntBASIC15.04■□□□□ -0
CTPS2Q9NRF8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CTPS2Q9NRF8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms