Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 SSR4P1-203ENST00000599569 2260 ntBASIC19.19■□□□□ 0.66
RTN4Q9NQC3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AC010460.3-201ENST00000511359 1579 ntBASIC19.19■□□□□ 0.66
RTN4Q9NQC3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 GPR32P1-201ENST00000601788 811 ntBASIC19.18■□□□□ 0.66
RTN4Q9NQC3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RTN4Q9NQC3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AC093525.9-201ENST00000624961 1746 ntBASIC19.17■□□□□ 0.66
RTN4Q9NQC3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 SEPT7P2-202ENST00000398921 823 ntBASIC19.17■□□□□ 0.66
RTN4Q9NQC3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
RTN4Q9NQC3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4Q9NQC3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.16■□□□□ 0.66
RTN4Q9NQC3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4Q9NQC3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms