Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC006058.4-201ENST00000624016 1670 ntBASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC079781.3-201ENST00000449110 356 ntBASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC023141.13-201ENST00000604991 943 ntBASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC140658.5-201ENST00000438532 169 ntBASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC079776.4-201ENST00000511039 504 ntBASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AL662844.1-201ENST00000546340 181 ntBASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 RN7SL510P-201ENST00000581311 263 ntBASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AL031008.1-201ENST00000619963 541 ntBASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms