Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 CDC14C-201ENST00000428251 1719 ntBASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 LINC02447-202ENST00000501888 2146 ntBASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM62Q9BVG3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC100757.3-201ENST00000622361 1406 ntBASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC092580.3-201ENST00000430932 139 ntBASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 ZNF890P-202ENST00000530367 1156 ntBASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL450472.2-201ENST00000603663 1156 ntBASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AL033527.5-202ENST00000641632 1098 ntBASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM62Q9BVG3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRIM62Q9BVG3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms