Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDX2Q99626 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.49■□□□□ 0.23
CDX2Q99626 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDX2Q99626 KRT8P29-201ENST00000420409 1371 ntBASIC16.49■□□□□ 0.23
CDX2Q99626 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.49■□□□□ 0.23
CDX2Q99626 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.49■□□□□ 0.23
CDX2Q99626 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDX2Q99626 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.48■□□□□ 0.23
CDX2Q99626 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 AC092068.3-201ENST00000587894 2016 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.48■□□□□ 0.23
CDX2Q99626 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.48■□□□□ 0.23
CDX2Q99626 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 ACTBP8-201ENST00000403258 1108 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.48■□□□□ 0.23
CDX2Q99626 RPL7P35-201ENST00000446943 740 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.48■□□□□ 0.23
CDX2Q99626 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.48■□□□□ 0.23
CDX2Q99626 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.48■□□□□ 0.23
CDX2Q99626 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.48■□□□□ 0.23
CDX2Q99626 MIR6842-201ENST00000612539 65 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 AL157791.1-201ENST00000553667 1699 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDX2Q99626 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
CDX2Q99626 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 PCGF3-213ENST00000620529 1899 ntBASIC16.48■□□□□ 0.23
CDX2Q99626 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.48■□□□□ 0.23
CDX2Q99626 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDX2Q99626 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 ABALON-201ENST00000629058 1903 ntBASIC16.47■□□□□ 0.23
CDX2Q99626 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 AL354877.1-201ENST00000424412 413 ntBASIC16.47■□□□□ 0.23
CDX2Q99626 PDIA3P2-201ENST00000428073 158 ntBASIC16.47■□□□□ 0.23
CDX2Q99626 FAM8A4P-201ENST00000435433 1213 ntBASIC16.47■□□□□ 0.23
CDX2Q99626 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.47■□□□□ 0.23
CDX2Q99626 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.47■□□□□ 0.23
CDX2Q99626 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 AP001002.3-201ENST00000623482 206 ntBASIC16.47■□□□□ 0.23
CDX2Q99626 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.47■□□□□ 0.23
CDX2Q99626 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDX2Q99626 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.47■□□□□ 0.23
CDX2Q99626 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
CDX2Q99626 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDX2Q99626 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.46■□□□□ 0.23
CDX2Q99626 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDX2Q99626 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 AL138799.1-201ENST00000448213 1675 ntBASIC16.46■□□□□ 0.23
CDX2Q99626 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDX2Q99626 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.46■□□□□ 0.23
CDX2Q99626 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.46■□□□□ 0.23
CDX2Q99626 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.46■□□□□ 0.23
CDX2Q99626 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDX2Q99626 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms