Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 LINC02447-202ENST00000501888 2146 ntBASIC13.36□□□□□ -0.27
S1PR3Q99500 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.36□□□□□ -0.27
S1PR3Q99500 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
S1PR3Q99500 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.36□□□□□ -0.27
S1PR3Q99500 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.36□□□□□ -0.27
S1PR3Q99500 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.36□□□□□ -0.27
S1PR3Q99500 AC040169.1-201ENST00000565382 521 ntBASIC13.36□□□□□ -0.27
S1PR3Q99500 AL365330.1-201ENST00000607459 531 ntBASIC13.36□□□□□ -0.27
S1PR3Q99500 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.36□□□□□ -0.27
S1PR3Q99500 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
S1PR3Q99500 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
S1PR3Q99500 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
S1PR3Q99500 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
S1PR3Q99500 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.36□□□□□ -0.27
S1PR3Q99500 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 CDC14C-201ENST00000428251 1719 ntBASIC13.36□□□□□ -0.27
S1PR3Q99500 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
S1PR3Q99500 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 AC092919.2-201ENST00000623631 1645 ntBASIC13.35□□□□□ -0.27
S1PR3Q99500 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.35□□□□□ -0.27
S1PR3Q99500 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.35□□□□□ -0.27
S1PR3Q99500 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 AC002056.1-201ENST00000395613 760 ntBASIC13.35□□□□□ -0.27
S1PR3Q99500 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.35□□□□□ -0.27
S1PR3Q99500 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.35□□□□□ -0.27
S1PR3Q99500 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 AL671883.3-201ENST00000603274 991 ntBASIC13.35□□□□□ -0.27
S1PR3Q99500 AC068137.2-201ENST00000605408 478 ntBASIC13.35□□□□□ -0.27
S1PR3Q99500 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.35□□□□□ -0.27
S1PR3Q99500 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.35□□□□□ -0.27
S1PR3Q99500 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 PMS2P7-201ENST00000506558 1336 ntBASIC13.35□□□□□ -0.27
S1PR3Q99500 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
S1PR3Q99500 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.35□□□□□ -0.27
S1PR3Q99500 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S1PR3Q99500 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms