Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 AL662844.4-201ENST00000606367 2838 ntBASIC16.31■□□□□ 0.2
NOTCH4Q99466 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 AL139099.5-201ENST00000635274 300 ntBASIC16.3■□□□□ 0.2
NOTCH4Q99466 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.3■□□□□ 0.2
NOTCH4Q99466 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NOTCH4Q99466 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.29■□□□□ 0.2
NOTCH4Q99466 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC007969.1-201ENST00000433675 447 ntBASIC16.29■□□□□ 0.2
NOTCH4Q99466 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC025279.2-201ENST00000569730 653 ntBASIC16.29■□□□□ 0.2
NOTCH4Q99466 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AC244093.1-201ENST00000610837 814 ntBASIC16.29■□□□□ 0.2
NOTCH4Q99466 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
NOTCH4Q99466 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 AL133338.1-201ENST00000565695 1517 ntBASIC16.29■□□□□ 0.2
NOTCH4Q99466 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NOTCH4Q99466 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.28■□□□□ 0.2
NOTCH4Q99466 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NOTCH4Q99466 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms