Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AC134407.2-201ENST00000625089 1978 ntBASIC17.04■□□□□ 0.32
TRIM11Q96F44 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 KRT8P23-201ENST00000560090 1207 ntBASIC17.04■□□□□ 0.32
TRIM11Q96F44 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AC026120.1-201ENST00000611536 926 ntBASIC17.04■□□□□ 0.32
TRIM11Q96F44 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 AC022532.1-201ENST00000624563 1728 ntBASIC17.04■□□□□ 0.32
TRIM11Q96F44 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM11Q96F44 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM11Q96F44 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 AC068587.6-202ENST00000641839 5619 ntBASIC17.03■□□□□ 0.32
TRIM11Q96F44 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 YBX2P1-201ENST00000394192 760 ntBASIC17.03■□□□□ 0.32
TRIM11Q96F44 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 RNA5SP410-201ENST00000516285 106 ntBASIC17.03■□□□□ 0.32
TRIM11Q96F44 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM11Q96F44 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRIM11Q96F44 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 HLA-H-201ENST00000383620 1096 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms