Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LSMEM1Q8N8F7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 AL355306.1-201ENST00000415580 579 ntBASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 GPX1P2-201ENST00000429271 606 ntBASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 FAM86C2P-203ENST00000528684 1004 ntBASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 AP001282.1-201ENST00000531301 1499 ntBASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSMEM1Q8N8F7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AL671277.1-201ENST00000429656 993 ntBASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AC040169.1-201ENST00000565382 521 ntBASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AL138918.1-201ENST00000568306 659 ntBASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AC091812.2-201ENST00000619081 385 ntBASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AC008267.7-201ENST00000624570 1194 ntBASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.79□□□□□ -0.04
LSMEM1Q8N8F7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.78□□□□□ -0.04
LSMEM1Q8N8F7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms