Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TUBB1P1-201ENST00000503144 1300 ntBASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS4Q8IUM7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 AL355994.2-201ENST00000447882 704 ntBASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 CSF2RBP1-201ENST00000447905 391 ntBASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 RN7SL219P-201ENST00000582872 296 ntBASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS4Q8IUM7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 REXO1L1P-202ENST00000608646 1974 ntBASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 MIR1908-201ENST00000410394 80 ntBASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AP000812.2-201ENST00000538934 718 ntBASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 CLUHP6-201ENST00000580789 941 ntBASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms