Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 FO393414.2-201ENST00000405153 598 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 AL844908.2-201ENST00000609461 460 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 AL033527.5-202ENST00000641632 1098 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 EEF1DP4-201ENST00000446006 880 ntBASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 AL512361.1-201ENST00000554200 418 ntBASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 AC092364.2-202ENST00000597012 1073 ntBASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRTM4Q86VH4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRTM4Q86VH4 AC134407.2-201ENST00000625089 1978 ntBASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM4Q86VH4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms