Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ALYREFQ86V81 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
ALYREFQ86V81 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ALYREFQ86V81 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALYREFQ86V81 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.92■□□□□ 0.3
ALYREFQ86V81 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AC243960.2-201ENST00000600996 747 ntBASIC16.92■□□□□ 0.3
ALYREFQ86V81 AL161645.1-201ENST00000622716 1255 ntBASIC16.92■□□□□ 0.3
ALYREFQ86V81 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
ALYREFQ86V81 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALYREFQ86V81 AC024909.3-201ENST00000611513 2257 ntBASIC16.91■□□□□ 0.3
ALYREFQ86V81 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AC124947.2-201ENST00000547118 1133 ntBASIC16.91■□□□□ 0.3
ALYREFQ86V81 MIR4722-201ENST00000578292 60 ntBASIC16.91■□□□□ 0.3
ALYREFQ86V81 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 AL021578.1-201ENST00000613646 709 ntBASIC16.91■□□□□ 0.3
ALYREFQ86V81 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALYREFQ86V81 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ALYREFQ86V81 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ALYREFQ86V81 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALYREFQ86V81 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms