Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC098850.1-201ENST00000419919 790 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 RPL13P2-201ENST00000440687 659 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC138969.3-201ENST00000546612 1459 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC138932.2-201ENST00000548268 1459 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC126755.4-201ENST00000549796 1459 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC018892.3-201ENST00000623986 2499 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 MEIS3P1-201ENST00000495167 958 ntBASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE3BQ7Z3V4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CU639417.3-201ENST00000624240 1404 ntBASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 MEP1AP4-201ENST00000423244 1087 ntBASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 PHKG1P2-201ENST00000457537 863 ntBASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CR383656.12-201ENST00000549567 513 ntBASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AC099568.2-201ENST00000609194 695 ntBASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBE3BQ7Z3V4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 MIR648-201ENST00000385046 94 ntBASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 KRT18P64-201ENST00000434946 1219 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms