Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 FAM197Y8-203ENST00000450145 560 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC073648.2-201ENST00000510116 352 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AF238378.1-201ENST00000526806 358 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC008608.2-201ENST00000606089 416 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AL021920.2-201ENST00000624828 1351 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 AC079776.4-201ENST00000511039 504 ntBASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 AC019129.2-201ENST00000609837 1235 ntBASIC14.15□□□□□ -0.14
C11orf88Q6PI97 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
C11orf88Q6PI97 HLA-A-201ENST00000376802 1334 ntBASIC14.15□□□□□ -0.15
C11orf88Q6PI97 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.15□□□□□ -0.15
C11orf88Q6PI97 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms