Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC011270.2-201ENST00000624293 2550 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC104109.2-201ENST00000602919 1418 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC025580.3-201ENST00000617932 1424 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AC016027.1-202ENST00000607927 1699 ntBASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 DBET-201ENST00000630918 3363 ntBASIC16.5■□□□□ 0.23
CASC4Q6P4E1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AC093724.1-201ENST00000448659 1027 ntBASIC16.5■□□□□ 0.23
CASC4Q6P4E1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AL078644.1-201ENST00000609881 752 ntBASIC16.5■□□□□ 0.23
CASC4Q6P4E1 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 AC004877.2-201ENST00000623941 599 ntBASIC16.5■□□□□ 0.23
CASC4Q6P4E1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.5■□□□□ 0.23
CASC4Q6P4E1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
CASC4Q6P4E1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms