Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AC008667.4-201ENST00000607370 168 ntBASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 MIR7706-201ENST00000613747 67 ntBASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AL139385.1-201ENST00000611744 3272 ntBASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 AL023775.1-201ENST00000454907 1746 ntBASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 RNF216P1-203ENST00000404404 2427 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 AC092053.1-201ENST00000605787 1936 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 PAWRP1-201ENST00000451083 565 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 AC079776.4-201ENST00000511039 504 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 AP002490.2-201ENST00000524791 560 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 AC116407.3-201ENST00000623905 1129 ntBASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM53Q6P2H8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms