Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 RPSAP36-202ENST00000494591 1261 ntBASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 ACR-203ENST00000529621 708 ntTSL 5 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 GRN-222ENST00000639447 1314 ntTSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CDC42BPAQ5VT25 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 MIR663B-201ENST00000408361 115 ntBASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 RNA5SP423-201ENST00000517127 109 ntBASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AP006547.1-201ENST00000563435 692 ntBASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 AC006453.4-201ENST00000636949 1252 ntBASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42BPAQ5VT25 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 B9D1-203ENST00000395615 805 ntTSL 3 BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 MIR4313-201ENST00000580760 101 ntBASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPAQ5VT25 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 OARD1-212ENST00000482515 832 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 AC148477.4-201ENST00000613430 1793 ntBASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 AC022211.2-201ENST00000585075 2527 ntBASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 AC105129.2-201ENST00000559536 390 ntBASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 CYGB-203ENST00000589145 788 ntTSL 3 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 AC091271.1-201ENST00000611877 1162 ntBASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 AP005019.2-201ENST00000615104 511 ntBASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms