Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BX539320.1-201ENST00000623759 877 ntBASIC13.74□□□□□ -0.21
LRRK2Q5S007 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.74□□□□□ -0.21
LRRK2Q5S007 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC136604.1-201ENST00000418535 575 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 AL008707.1-201ENST00000422498 534 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 FGFR3P1-201ENST00000449999 601 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 NOC2LP1-201ENST00000450578 752 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC090164.3-201ENST00000610780 2143 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 KRT18P25-201ENST00000508931 1278 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 ECM1P1-201ENST00000604092 1279 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 AL805961.1-203ENST00000641078 1258 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 AC098818.2-201ENST00000564925 2320 ntBASIC13.73□□□□□ -0.21
LRRK2Q5S007 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRK2Q5S007 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRK2Q5S007 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AL645728.1-201ENST00000366221 2101 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 ACTG1P2-201ENST00000415776 1125 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 ACTG1P11-201ENST00000425411 1125 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 AC079112.1-201ENST00000454972 939 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 POU5F1P6-201ENST00000466990 990 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 SLED1-202ENST00000512051 380 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AC006453.1-201ENST00000636037 1257 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 PRSS30P-206ENST00000641773 873 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AC245100.5-201ENST00000452108 331 ntBASIC13.72□□□□□ -0.21
LRRK2Q5S007 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRK2Q5S007 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRK2Q5S007 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms