Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 CDC14C-201ENST00000428251 1719 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 RPL13P2-201ENST00000440687 659 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ATP5G2P4-201ENST00000442175 420 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 AL359881.2-201ENST00000602973 570 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 AD000864.1-201ENST00000624076 2295 ntBASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC079776.1-201ENST00000401540 1152 ntBASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AL391069.4-201ENST00000609583 481 ntBASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 AC134407.2-201ENST00000625089 1978 ntBASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNFT1Q5M7Z0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 TMEM14DP-201ENST00000422205 345 ntBASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 GPR53P-205ENST00000457298 1084 ntBASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 IGHV3-71-201ENST00000523324 359 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms