Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC005229.1-201ENST00000392885 409 ntBASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC092933.1-201ENST00000393644 945 ntBASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 PHKG1P2-201ENST00000457537 863 ntBASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC068587.3-201ENST00000526613 355 ntBASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC120045.2-201ENST00000567334 178 ntBASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 AC005332.8-201ENST00000622750 2735 ntBASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RPL7P3-201ENST00000441388 714 ntBASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 CSF2RBP1-201ENST00000447905 391 ntBASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AL049840.4-201ENST00000602422 811 ntBASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AC097359.3-201ENST00000603982 1210 ntBASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM71Q2Q1W2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 AP001282.1-201ENST00000531301 1499 ntBASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 SOCS2P1-201ENST00000417727 557 ntBASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 VDAC1P7-201ENST00000462417 847 ntBASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms