Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 AL355385.1-201ENST00000606123 409 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 AL033527.5-202ENST00000641632 1098 ntBASIC16.18■□□□□ 0.18
AP1S1P61966 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.18■□□□□ 0.18
AP1S1P61966 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S1P61966 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S1P61966 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S1P61966 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 REXO1L1P-202ENST00000608646 1974 ntBASIC16.17■□□□□ 0.18
AP1S1P61966 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.17■□□□□ 0.18
AP1S1P61966 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.17■□□□□ 0.18
AP1S1P61966 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.17■□□□□ 0.18
AP1S1P61966 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.17■□□□□ 0.18
AP1S1P61966 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
AP1S1P61966 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
AP1S1P61966 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S1P61966 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S1P61966 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 AC024909.3-201ENST00000611513 2257 ntBASIC16.16■□□□□ 0.18
AP1S1P61966 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S1P61966 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S1P61966 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
AP1S1P61966 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
AP1S1P61966 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP1S1P61966 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.16■□□□□ 0.18
AP1S1P61966 TSSK5P-201ENST00000423978 907 ntBASIC16.16■□□□□ 0.18
AP1S1P61966 HIST3H2BA-201ENST00000436555 524 ntBASIC16.16■□□□□ 0.18
AP1S1P61966 AL512638.1-201ENST00000457493 794 ntBASIC16.16■□□□□ 0.18
AP1S1P61966 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S1P61966 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S1P61966 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.16■□□□□ 0.18
AP1S1P61966 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.16■□□□□ 0.18
AP1S1P61966 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.16■□□□□ 0.18
AP1S1P61966 ZNF890P-202ENST00000530367 1156 ntBASIC16.16■□□□□ 0.18
AP1S1P61966 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP1S1P61966 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S1P61966 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S1P61966 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S1P61966 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms