Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.79□□□□□ -0.52
APOC4P55056 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 PIN1P1-201ENST00000412108 996 ntBASIC11.79□□□□□ -0.52
APOC4P55056 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 AC009477.1-201ENST00000452936 217 ntBASIC11.79□□□□□ -0.52
APOC4P55056 UGT1A2P-201ENST00000454886 866 ntBASIC11.79□□□□□ -0.52
APOC4P55056 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.79□□□□□ -0.52
APOC4P55056 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.79□□□□□ -0.52
APOC4P55056 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.79□□□□□ -0.52
APOC4P55056 AC135586.1-201ENST00000539323 574 ntBASIC11.79□□□□□ -0.52
APOC4P55056 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 CYP4F24P-201ENST00000586049 1580 ntBASIC11.79□□□□□ -0.52
APOC4P55056 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC4P55056 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
APOC4P55056 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 HAUS4P1-201ENST00000406739 1145 ntBASIC11.78□□□□□ -0.52
APOC4P55056 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC4P55056 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.78□□□□□ -0.52
APOC4P55056 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.78□□□□□ -0.52
APOC4P55056 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.78□□□□□ -0.52
APOC4P55056 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC4P55056 AL844908.2-201ENST00000609461 460 ntBASIC11.78□□□□□ -0.52
APOC4P55056 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC4P55056 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC4P55056 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
APOC4P55056 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 REXO1L8P-201ENST00000604378 1897 ntBASIC11.78□□□□□ -0.52
APOC4P55056 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
APOC4P55056 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
APOC4P55056 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC4P55056 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC4P55056 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC4P55056 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms