Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP98P52948 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.69■□□□□ 0.74
NUP98P52948 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP98P52948 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP98P52948 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP98P52948 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP98P52948 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NUP98P52948 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP98P52948 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUP98P52948 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.68■□□□□ 0.74
NUP98P52948 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.68■□□□□ 0.74
NUP98P52948 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.68■□□□□ 0.74
NUP98P52948 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.68■□□□□ 0.74
NUP98P52948 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NUP98P52948 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
NUP98P52948 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP98P52948 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NUP98P52948 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.67■□□□□ 0.74
NUP98P52948 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.67■□□□□ 0.74
NUP98P52948 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUP98P52948 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.67■□□□□ 0.74
NUP98P52948 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.67■□□□□ 0.74
NUP98P52948 AL590640.2-201ENST00000457038 527 ntBASIC19.67■□□□□ 0.74
NUP98P52948 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.67■□□□□ 0.74
NUP98P52948 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.67■□□□□ 0.74
NUP98P52948 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUP98P52948 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.67■□□□□ 0.74
NUP98P52948 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
NUP98P52948 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.67■□□□□ 0.74
NUP98P52948 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NUP98P52948 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NUP98P52948 RN7SL219P-201ENST00000582872 296 ntBASIC19.67■□□□□ 0.74
NUP98P52948 MIR6869-201ENST00000619434 62 ntBASIC19.67■□□□□ 0.74
NUP98P52948 GPR182-203ENST00000622922 591 ntBASIC19.67■□□□□ 0.74
NUP98P52948 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUP98P52948 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP98P52948 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 AC092364.2-201ENST00000596710 2692 ntBASIC19.66■□□□□ 0.74
NUP98P52948 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP98P52948 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP98P52948 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 AC007969.1-201ENST00000433675 447 ntBASIC19.66■□□□□ 0.74
NUP98P52948 ACTBP11-201ENST00000436287 1126 ntBASIC19.66■□□□□ 0.74
NUP98P52948 GAPDHP40-201ENST00000505218 1006 ntBASIC19.66■□□□□ 0.74
NUP98P52948 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.66■□□□□ 0.74
NUP98P52948 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP98P52948 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.66■□□□□ 0.74
NUP98P52948 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP98P52948 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP98P52948 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP98P52948 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP98P52948 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NUP98P52948 KRT8P44-201ENST00000441609 1350 ntBASIC19.65■□□□□ 0.74
NUP98P52948 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
NUP98P52948 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP98P52948 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP98P52948 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP98P52948 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP98P52948 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP98P52948 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP98P52948 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.65■□□□□ 0.74
NUP98P52948 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP98P52948 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP98P52948 MIR6787-201ENST00000616675 61 ntBASIC19.65■□□□□ 0.74
NUP98P52948 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP98P52948 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP98P52948 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms