Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.04■□□□□ 0.64
TNNI2P48788 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.04■□□□□ 0.64
TNNI2P48788 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.04■□□□□ 0.64
TNNI2P48788 AC133539.2-201ENST00000604757 467 ntBASIC19.04■□□□□ 0.64
TNNI2P48788 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNNI2P48788 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.04■□□□□ 0.64
TNNI2P48788 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNNI2P48788 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TNNI2P48788 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNNI2P48788 CROCCP1-201ENST00000426910 5675 ntBASIC19.04■□□□□ 0.64
TNNI2P48788 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
TNNI2P48788 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNNI2P48788 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TNNI2P48788 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TNNI2P48788 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNNI2P48788 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 KRT8P37-201ENST00000451609 1420 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 KRT8P22-201ENST00000562317 1415 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 CROCCP4-201ENST00000457096 498 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 SNX29P1-201ENST00000548357 1007 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.03■□□□□ 0.64
TNNI2P48788 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 AC233724.13-201ENST00000598383 410 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 AL158212.4-201ENST00000624062 1286 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 AL033527.4-201ENST00000641026 673 ntBASIC19.03■□□□□ 0.64
TNNI2P48788 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.03■□□□□ 0.64
TNNI2P48788 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNNI2P48788 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNNI2P48788 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 FLJ38576-201ENST00000623820 2459 ntBASIC19.02■□□□□ 0.64
TNNI2P48788 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.02■□□□□ 0.64
TNNI2P48788 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
TNNI2P48788 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.02■□□□□ 0.64
TNNI2P48788 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TNNI2P48788 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
TNNI2P48788 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 EEF1DP4-201ENST00000446006 880 ntBASIC19.02■□□□□ 0.64
TNNI2P48788 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.02■□□□□ 0.64
TNNI2P48788 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TNNI2P48788 AL391069.4-201ENST00000609583 481 ntBASIC19.02■□□□□ 0.64
TNNI2P48788 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.02■□□□□ 0.64
TNNI2P48788 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.02■□□□□ 0.64
TNNI2P48788 HLA-A-202ENST00000376806 1854 ntBASIC19.02■□□□□ 0.64
TNNI2P48788 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.02■□□□□ 0.64
TNNI2P48788 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.02■□□□□ 0.64
TNNI2P48788 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNNI2P48788 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNNI2P48788 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
TNNI2P48788 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNNI2P48788 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
TNNI2P48788 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNNI2P48788 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNNI2P48788 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TNNI2P48788 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.01■□□□□ 0.63
TNNI2P48788 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TNNI2P48788 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 AC092171.3-201ENST00000610122 2651 ntBASIC19.01■□□□□ 0.63
TNNI2P48788 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNNI2P48788 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms