Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC1A3P43003 AL589702.1-201ENST00000641229 1509 ntBASIC14.87□□□□□ -0.03
SLC1A3P43003 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC1A3P43003 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 ACTG1P14-201ENST00000446382 1122 ntBASIC14.86□□□□□ -0.03
SLC1A3P43003 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC1A3P43003 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.86□□□□□ -0.03
SLC1A3P43003 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC1A3P43003 AL365330.1-201ENST00000607459 531 ntBASIC14.86□□□□□ -0.03
SLC1A3P43003 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 C20orf181-201ENST00000623918 480 ntBASIC14.86□□□□□ -0.03
SLC1A3P43003 AC112504.1-201ENST00000623415 1841 ntBASIC14.86□□□□□ -0.03
SLC1A3P43003 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC1A3P43003 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A3P43003 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A3P43003 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A3P43003 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC1A3P43003 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 YBX2P1-201ENST00000394192 760 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 TFAMP1-201ENST00000412727 736 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 RN7SL589P-201ENST00000481268 310 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC1A3P43003 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AL135744.1-201ENST00000565098 629 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC1A3P43003 AL671883.3-201ENST00000603274 991 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A3P43003 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A3P43003 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 AC013268.4-201ENST00000637413 2228 ntBASIC14.85□□□□□ -0.03
SLC1A3P43003 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A3P43003 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A3P43003 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms