Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CDKN1AP38936 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AP006294.1-201ENST00000415407 339 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDKN1AP38936 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.77□□□□□ -0.21
CDKN1AP38936 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 ZNF890P-202ENST00000530367 1156 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.77□□□□□ -0.21
CDKN1AP38936 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AL359881.2-201ENST00000602973 570 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 CHCHD2P3-201ENST00000603038 451 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN1AP38936 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 AC007431.3-201ENST00000623221 587 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 AL136379.1-201ENST00000623471 2642 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 AL033527.5-202ENST00000641632 1098 ntBASIC13.77□□□□□ -0.21
CDKN1AP38936 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN1AP38936 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
CDKN1AP38936 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 KRT8P12-202ENST00000472924 1397 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
CDKN1AP38936 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 ATP5G2P4-201ENST00000442175 420 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 INE1-201ENST00000456273 945 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 RN7SL752P-201ENST00000463779 287 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 AC093004.1-201ENST00000508850 424 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.76□□□□□ -0.21
CDKN1AP38936 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CDKN1AP38936 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.76□□□□□ -0.21
CDKN1AP38936 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.76□□□□□ -0.21
CDKN1AP38936 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.76□□□□□ -0.21
CDKN1AP38936 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDKN1AP38936 AL109936.8-201ENST00000641772 604 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
CDKN1AP38936 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.76□□□□□ -0.21
CDKN1AP38936 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.76□□□□□ -0.21
CDKN1AP38936 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 PCGF3-213ENST00000620529 1899 ntBASIC13.76□□□□□ -0.21
CDKN1AP38936 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDKN1AP38936 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDKN1AP38936 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms