Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
HMGCLP35914 PMS2P2-201ENST00000425039 1128 ntBASIC16■□□□□ 0.15
HMGCLP35914 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16■□□□□ 0.15
HMGCLP35914 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16■□□□□ 0.15
HMGCLP35914 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16■□□□□ 0.15
HMGCLP35914 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16■□□□□ 0.15
HMGCLP35914 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16■□□□□ 0.15
HMGCLP35914 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCLP35914 FO538757.1-201ENST00000623083 1397 ntBASIC16■□□□□ 0.15
HMGCLP35914 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.99■□□□□ 0.15
HMGCLP35914 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.99■□□□□ 0.15
HMGCLP35914 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HMGCLP35914 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HMGCLP35914 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGCLP35914 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HMGCLP35914 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.99■□□□□ 0.15
HMGCLP35914 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGCLP35914 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCLP35914 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HMGCLP35914 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGCLP35914 AL158211.3-201ENST00000607385 239 ntBASIC15.99■□□□□ 0.15
HMGCLP35914 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGCLP35914 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HMGCLP35914 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 AP005117.1-202ENST00000581724 1908 ntBASIC15.99■□□□□ 0.15
HMGCLP35914 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGCLP35914 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCLP35914 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.99■□□□□ 0.15
HMGCLP35914 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCLP35914 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGCLP35914 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGCLP35914 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HMGCLP35914 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HMGCLP35914 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGCLP35914 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HMGCLP35914 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.98■□□□□ 0.15
HMGCLP35914 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms