Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.34■□□□□ 0.53
COPB2P35606 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.34■□□□□ 0.53
COPB2P35606 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.34■□□□□ 0.53
COPB2P35606 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COPB2P35606 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.33■□□□□ 0.53
COPB2P35606 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 PCDHB19P-201ENST00000570871 2371 ntBASIC18.33■□□□□ 0.53
COPB2P35606 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.33■□□□□ 0.53
COPB2P35606 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
COPB2P35606 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPB2P35606 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COPB2P35606 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COPB2P35606 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COPB2P35606 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 HLA-V-201ENST00000429037 534 ntBASIC18.33■□□□□ 0.52
COPB2P35606 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.33■□□□□ 0.52
COPB2P35606 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.33■□□□□ 0.52
COPB2P35606 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.33■□□□□ 0.52
COPB2P35606 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPB2P35606 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COPB2P35606 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COPB2P35606 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
COPB2P35606 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.32■□□□□ 0.52
COPB2P35606 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 AL442647.2-201ENST00000429864 857 ntBASIC18.32■□□□□ 0.52
COPB2P35606 RPL13P2-201ENST00000440687 659 ntBASIC18.32■□□□□ 0.52
COPB2P35606 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.32■□□□□ 0.52
COPB2P35606 RN7SL399P-201ENST00000471648 279 ntBASIC18.32■□□□□ 0.52
COPB2P35606 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.32■□□□□ 0.52
COPB2P35606 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.32■□□□□ 0.52
COPB2P35606 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.32■□□□□ 0.52
COPB2P35606 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 AL391069.4-201ENST00000609583 481 ntBASIC18.32■□□□□ 0.52
COPB2P35606 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.32■□□□□ 0.52
COPB2P35606 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COPB2P35606 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COPB2P35606 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPB2P35606 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPB2P35606 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.31■□□□□ 0.52
COPB2P35606 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.31■□□□□ 0.52
COPB2P35606 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 BOLA2P3-201ENST00000404566 256 ntBASIC18.31■□□□□ 0.52
COPB2P35606 MIR1909-201ENST00000411312 80 ntBASIC18.31■□□□□ 0.52
COPB2P35606 AZGP1P1-201ENST00000411909 902 ntBASIC18.31■□□□□ 0.52
COPB2P35606 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.31■□□□□ 0.52
COPB2P35606 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.31■□□□□ 0.52
COPB2P35606 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.31■□□□□ 0.52
COPB2P35606 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.31■□□□□ 0.52
COPB2P35606 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.31■□□□□ 0.52
COPB2P35606 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms