Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 MIR346-201ENST00000362234 95 ntBASIC14.34□□□□□ -0.11
HOXC12P31275 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 NME2P1-201ENST00000426182 414 ntBASIC14.34□□□□□ -0.11
HOXC12P31275 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 AC093724.1-201ENST00000448659 1027 ntBASIC14.34□□□□□ -0.11
HOXC12P31275 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.34□□□□□ -0.11
HOXC12P31275 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 AC069120.2-201ENST00000524091 540 ntBASIC14.34□□□□□ -0.11
HOXC12P31275 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXC12P31275 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXC12P31275 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 AC025048.6-201ENST00000634326 1161 ntBASIC14.34□□□□□ -0.11
HOXC12P31275 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXC12P31275 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXC12P31275 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HOXC12P31275 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXC12P31275 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.11
HOXC12P31275 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
HOXC12P31275 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HOXC12P31275 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HOXC12P31275 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXC12P31275 PRORSD1P-202ENST00000563365 2154 ntBASIC14.33□□□□□ -0.11
HOXC12P31275 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 PCDHA3-202ENST00000532566 4594 ntBASIC14.33□□□□□ -0.12
HOXC12P31275 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HOXC12P31275 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXC12P31275 SPDYE14P-201ENST00000442619 822 ntBASIC14.33□□□□□ -0.12
HOXC12P31275 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.33□□□□□ -0.12
HOXC12P31275 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 AL596325.1-201ENST00000563991 1082 ntBASIC14.33□□□□□ -0.12
HOXC12P31275 RARRES2P9-201ENST00000565168 469 ntBASIC14.33□□□□□ -0.12
HOXC12P31275 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
HOXC12P31275 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXC12P31275 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXC12P31275 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms