Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 AC105250.1-201ENST00000509378 2057 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 AC011477.6-201ENST00000604980 1927 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 CICP24-201ENST00000605464 2705 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 MRPL20P1-201ENST00000400819 433 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 FAM185BP-201ENST00000443595 716 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 AC093724.1-201ENST00000448659 1027 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.72■□□□□ 0.11
EPHA3P29320 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 MIR1199-201ENST00000621445 119 ntBASIC15.72■□□□□ 0.11
EPHA3P29320 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHA3P29320 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
EPHA3P29320 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHA3P29320 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
EPHA3P29320 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 AC106881.1-201ENST00000605849 3329 ntBASIC15.71■□□□□ 0.11
EPHA3P29320 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
EPHA3P29320 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 PMS2P4-201ENST00000412466 1052 ntBASIC15.71■□□□□ 0.11
EPHA3P29320 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHA3P29320 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHA3P29320 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 AL356488.2-201ENST00000602755 427 ntBASIC15.71■□□□□ 0.11
EPHA3P29320 AC004790.2-201ENST00000623588 572 ntBASIC15.71■□□□□ 0.11
EPHA3P29320 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
EPHA3P29320 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHA3P29320 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
EPHA3P29320 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHA3P29320 AC091951.1-201ENST00000512854 2465 ntBASIC15.71■□□□□ 0.1
EPHA3P29320 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
EPHA3P29320 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
EPHA3P29320 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
EPHA3P29320 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHA3P29320 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
EPHA3P29320 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.71■□□□□ 0.1
EPHA3P29320 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.71■□□□□ 0.1
EPHA3P29320 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHA3P29320 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHA3P29320 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHA3P29320 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
EPHA3P29320 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHA3P29320 SNX18-202ENST00000343017 3140 ntBASIC15.7■□□□□ 0.1
EPHA3P29320 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.7■□□□□ 0.1
EPHA3P29320 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms