Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC3P19447 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ERCC3P19447 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ERCC3P19447 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC3P19447 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC3P19447 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC3P19447 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC3P19447 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.64■□□□□ 0.58
ERCC3P19447 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ERCC3P19447 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 AL603756.1-201ENST00000606511 2163 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 AC092364.2-201ENST00000596710 2692 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.64■□□□□ 0.57
ERCC3P19447 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ERCC3P19447 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ERCC3P19447 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ERCC3P19447 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ERCC3P19447 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.64■□□□□ 0.57
ERCC3P19447 GPR53P-205ENST00000457298 1084 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 AC132938.2-201ENST00000579188 680 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERCC3P19447 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 AC007431.3-201ENST00000623221 587 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 AC004461.2-201ENST00000629517 803 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 AL591163.1-201ENST00000641757 987 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 SLC7A15P-201ENST00000424028 1363 ntBASIC18.64■□□□□ 0.57
ERCC3P19447 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.64■□□□□ 0.57
ERCC3P19447 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC3P19447 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.64■□□□□ 0.57
ERCC3P19447 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC3P19447 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ERCC3P19447 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 AL512384.1-201ENST00000406683 331 ntBASIC18.63■□□□□ 0.57
ERCC3P19447 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC3P19447 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 SDHAP3-202ENST00000515467 728 ntBASIC18.63■□□□□ 0.57
ERCC3P19447 IGHV3-71-201ENST00000523324 359 ntBASIC18.63■□□□□ 0.57
ERCC3P19447 HILS1-202ENST00000545329 423 ntBASIC18.63■□□□□ 0.57
ERCC3P19447 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.63■□□□□ 0.57
ERCC3P19447 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ERCC3P19447 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC3P19447 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC3P19447 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC3P19447 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms