Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 SPDYE19P-201ENST00000338590 713 ntBASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GNAQP1-201ENST00000444815 1067 ntBASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40ALP0C0E4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 KRT17P7-201ENST00000451704 1104 ntBASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB40ALP0C0E4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms