Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RB1P06400 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.88■□□□□ 0.29
RB1P06400 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 CNN2P8-201ENST00000421872 913 ntBASIC16.88■□□□□ 0.29
RB1P06400 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.88■□□□□ 0.29
RB1P06400 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.88■□□□□ 0.29
RB1P06400 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.88■□□□□ 0.29
RB1P06400 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.88■□□□□ 0.29
RB1P06400 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.88■□□□□ 0.29
RB1P06400 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.88■□□□□ 0.29
RB1P06400 AC000095.1-201ENST00000603208 874 ntBASIC16.88■□□□□ 0.29
RB1P06400 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 AC244669.2-201ENST00000612320 853 ntBASIC16.88■□□□□ 0.29
RB1P06400 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
RB1P06400 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 AC009542.2-202ENST00000619004 1067 ntBASIC16.88■□□□□ 0.29
RB1P06400 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
RB1P06400 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RB1P06400 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 PP12613-201ENST00000424958 2230 ntBASIC16.88■□□□□ 0.29
RB1P06400 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RB1P06400 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RB1P06400 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.87■□□□□ 0.29
RB1P06400 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.87■□□□□ 0.29
RB1P06400 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RB1P06400 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 KRT18P64-201ENST00000434946 1219 ntBASIC16.87■□□□□ 0.29
RB1P06400 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 PHKG1P2-201ENST00000457537 863 ntBASIC16.87■□□□□ 0.29
RB1P06400 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.87■□□□□ 0.29
RB1P06400 AC022137.2-201ENST00000503482 481 ntBASIC16.87■□□□□ 0.29
RB1P06400 AC106760.1-201ENST00000508690 800 ntBASIC16.87■□□□□ 0.29
RB1P06400 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.87■□□□□ 0.29
RB1P06400 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RB1P06400 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.87■□□□□ 0.29
RB1P06400 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.87■□□□□ 0.29
RB1P06400 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RB1P06400 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RB1P06400 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms